‘Time Capsule’ Rocks And Earth’s Mantle | Genetically Engineering Stronger Wood - podcast episode cover

‘Time Capsule’ Rocks And Earth’s Mantle | Genetically Engineering Stronger Wood

Sep 12, 202418 minEp. 858
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Samples of 2.5 billion-year-old mantle rocks found at spreading ocean ridges could put bounds on models of how the planet formed. And, researchers decreased the amount of lignin in poplar tree wood, making it stronger and slower to deteriorate.

‘Time Capsule’ Rocks Provide Clues About Earth’s Mantle

If you’re looking to really learn about the history of our planet, look to geology. Ancient rocks can provide a time capsule of the conditions in which they formed. But even the geologic record has its limits—rocks and minerals get weathered, buried, heated, melted, and recycled over time—so geologists need to search out rare super-old geologic holdouts to tell about the earliest times.

Writing in the journal Nature in July, researchers described what they can learn about the chemical history of Earth’s mantle, the geologic layer beneath the planet’s crust, from studying 2.5 billion-year-old rocks collected at spreading ocean ridges. They found that these unusual mantle rocks didn’t necessarily have to have been formed in a world with less available oxygen, but could have been produced just by the mantle layer being hotter long ago.

Dr. Elizabeth Cottrell, chair of the Department of Mineral Sciences at the Smithsonian’s National Museum of Natural History, joins Ira to talk about the research and why a collection of old rocks is an important part of international scientific infrastructure.

Genetically Engineering Stronger Poplar Tree Wood

Trees play a big role in the fight against climate change: They can soak up carbon dioxide from the air and store it for centuries in the form of biomass. But it turns out that trees could be doing even more.

In 2023, Science Friday covered how the company Living Carbon had genetically engineered poplar trees to have a more efficient photosynthesis process. This allowed the trees to grow twice as fast and store 30% more carbon biomass than regular poplars, making them ideal for the carbon credit market.

Recently, researchers at the University of Maryland also experimented with genetically modifying poplar trees. But this time, they had a different goal in mind. They modified the tree to reduce the amount of lignin in its wood. This made the wood stronger without the need for harsh chemical processing. It also slowed the deterioration rate of the wood, which allows it to store carbon for longer periods.

To explain more about this “super wood,” SciFri guest host Sophie Bushwick is joined by the lead plant geneticist on the study, Dr. Yiping Qi, associate professor at Department of Plant Science and Landscape Architecture at the University of Maryland.

Transcripts for each segment will be available after the show airs on sciencefriday.com.

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Transcript

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What if you could engineer a kind of wood that was stronger and more durable, but also could help soak up carbon from the atmosphere? We have another way to really retain the sort of fixed CO2 in the wood material. So in this way we can sequest more carbon over time. It's Thursday, September 12th, and you're listening to Science Friday.

I'm Cyfry producer Charles Berkwist. Last year we featured a story about a genetically engineered popular tree that could grow twice as fast to store 30% more carbon. Now researchers at the University of Maryland have their own advance in genetically modifying popular trees, but they had a different goal. Instead of growing faster, they aim to make the wood stronger, so it could be turned into lumber without the need for harsh chemical processing.

This modification also made the wood more durable, allowing the trees to sequester carbon from the atmosphere. Sophie Bushwick takes you inside that wood project, but first, how scientists are learning about early days on Earth by looking at 2.5 billion year old rocks from the bottom of the sea? Joining me now is Dr. Elizabeth Cotroll, Chair of the Department of Mineral Sciences at the Smithsonian National Museum of Natural History.

She's also curator of the National Rock Collection. Did you know we had one? And co-author of this study. Welcome back to Science Friday. Thanks. It's my pleasure to be here. Do we have a National Rock Collection? We do. We do have a National Rock Collection, and it's really an important part of US scientific infrastructure and international scientific infrastructure. We've rocks from all over the world, and they are freely available for study to researchers around the globe.

If you think about it, we often spend a lot of money to go and get rocks from exotic locations, and it makes a lot of sense to curate them and make them available for use again, rather than having to go back and recollect them. Yeah, I know you showed me some of these great old rocks, but I don't want to get off the track here because we could easily talk about rocks, one of my favorite subjects. I want to get on the track to talk about where do you get a 2.5 billion year old rock?

Well, the most common locations for super old rocks are on the continents, but in this case, we think we have really old rocks that have been dredged from the sea floor. So the rocks in our study come from three different locations on the sea floor. One set of rocks was actually recovered by ice breakers under the North Pole. No kidding.

Yeah, another set of rocks was recovered from the sea floor south of Africa between Africa and Antarctica, and another set of rocks was recovered from the sea floor in the Pacific Ocean. So we've gone to great lengths to acquire these rocks. They're all from locations on the sea floor where the earth's crust is spreading apart and new ocean floor, new ocean crust is being created. Hmm. You mentioned the difficulty of getting these rocks. Are they rare? Are there a lot of them?

Well, this rock type in our study is not rare on the global scale. The mantle of our planet is about 70% of the volume of our planet. So by that metric, mantle rocks are not rare on the earth, but finding them at the surface is difficult. And that is rare because when the mantle melts, it creates the earth's crust.

It covers up the mantle. These few settings on the planet are places where the mantle is exposed, for example, in fractures. And we can send ships out, dredge the sea floor, literally drag, you know, a bucket along the sea floor. And kind of go fishing for rocks. And in these rare locations, we find pieces of the mantle. Wow. And if you showed me one, what would it look like? I mean, does it look any different from an ordinary rock?

Well, no, probably not. They have abundant quantities of the mineral, all of them. Now, you may know the mineral, all of them by the trade name, Parado. It's August's birthstone, green mineral. And that's the dominant mineral in this rock called peridotite, peridotite, named after this all of them.

But often these rocks on the sea floor, you know, they've, they've rusted somewhat. And so they can appear weathered in orange. They also have the minerals orthopiric scene and spinel, which may or may not be minerals that you've heard of commonly. And then deeper in the earth's mantle, the mineral garnet replaces this mineral, Spanel, but peridotites with garnet are not recovered from the sea floor. So our rocks that we studied here are the minerals, all of them orthopiric scene and spinel.

So these mantle rocks are unusual, but are these the oldest rocks around? No, by no means. These are not likely to be the oldest rocks around, but they are likely to be older than the average mantle that circulates and is recovered from these sea floor locations. And how do you, how do you date the rocks? How do you know just how old they are? We don't know how old these rocks are. What I can tell you about these rocks is that they have melted to extreme extents.

If you think of these, these rocks are the residues of creating the earth's crust. In other words, these rocks have melted and given up their melt to create the earth's crust. And so if you think of us ringing out a sponge and the water coming out, these rocks in our study have been squoze dry. The melt has been extracted and it's been extracted to a large extent, an unusual extent that we infer happened under really hot conditions deep in the earth.

And those kind of temperatures are not really available today, but would have been available in the Archaean E on billions of years ago when the earth was hotter. So what do you, what do you seek to learn from them? What can I tell you? Our team is interested in the history of oxygen in the deep earth. We are interested to understand how our planet evolves, how new crust forms and the role of oxygen in that process.

It's all part of this big story about how earth has formed, how it's evolved and how our planet has become habitable. One of the interesting things about the history of oxygen in the mantle is that the oxygen availability in these rocks governs things as basic as the gases that are emitted from volcanoes, the gases that would have formed Earth's earliest atmosphere.

So when we're thinking about planets and planetary formation and signatures of habitability, it all comes back to the rocks that make up the interiors of planets. So these rocks, as you say, they melted at a very high temperature, but without doing the equivalent of rusting? Yeah, you are bringing up a prime example of oxidation in our everyday lives. Corrosion is an example of iron oxidation and when metal rusts and iron atom loses it in an electron, this is oxidation.

You're exactly right. So that is exactly what we're looking at in these samples. That's what we're analyzing. We're looking at the amounts of oxidized iron and reduced iron to tell us something about how active oxygen was in the mantle in these ancient times.

So it tells us something about how the composition of the Earth's mantle has evolved, or in this case, we're suggesting that it hasn't evolved so much and that this chemical signature is generated simply by the natural process of the planet cooling rather than by some other process that could have changed its chemical composition. It's sort of the Earth just doesn't make rocks like it used to. That is the best way to say it.

How do you go further with this? Do you have to find more rocks or is this a thing you can follow up on in the lab? This is something that we can follow up both by analyzing more rocks. It's always good in any science to reproduce results and test additional hypotheses.

But we are definitely following up with laboratory work in our lab. We can create conditions such as our found in the deep Earth. We can create very high pressures and very high temperatures. And we can melt rocks in the lab and study the chemistry of that melting process under different conditions of oxygen availability under different temperature conditions and under different pressures.

So my group is particularly interested in following up on laboratory experiments to help us understand the rock record. What would be the take home lesson that you learned from the discovery of these rare old rocks? The take home message of our study is that we may be able to produce these really unusual chemistries in this type of rock by changing the temperature and pressure at which they melted and not by changing the bulk composition of the rock.

And that is really important because it really helps us as Earth scientists to eliminate or to support entire classes of models about how the planet formed and has evolved for these billions of years and how the atmosphere has evolved and how the interior of the planet has linked to planetary habitability. Well, Dr. Cotroll, I can talk about rocks forever because I love talking about them and looking at them. So I want to thank you for taking time to be with us today.

Thanks. It was so much fun. I'm thrilled to be here. Dr. Elizabeth Cotroll, chair of the Department of Mineral Sciences at the famous Smithsonian's National Museum of Natural History. She's also curator of the National Rock Collection. Starbucks iced apple crisp oat milk shaken espresso made with blonde espresso creamy oat milk and spiced apple flavors. It's an icy crisp sip you can enjoy all autumn long. Order ahead on the Starbucks app.

Support for Science Friday comes from the Alfred P. Sloan Foundation working to enhance public understanding of science, technology and economics in the modern world. We know trees play a big role in the fight against climate change. They soak up carbon dioxide from the air and store it for centuries in the form of biomass. But it turns out that trees could be doing even more.

Last year, Science Friday covered how the company living carbon had genetically engineered popular trees to grow twice as fast and store 30% more carbon than regular poplars. Now researchers at the University of Maryland have also dabbled in genetically modifying popular trees. But they have a different goal. They're aiming to make the woods stronger so it can be turned into lumber without the need for harsh chemical processing.

This modification also helps the wood last longer without deteriorating, which lets the trees store carbon for longer periods of time. Joining me to talk about this super wood is the lead plant geneticist of the study, Dr. E. Ping Chi, associate professor at the Department of Plant Science and Landscape Architecture at the University of Maryland. Welcome to Science Friday. Thank you so much for joining us. Nice to meet you Sophie.

Let's get into this super wood. What is it and how do you genetically engineer trees to produce it? Sure, yeah, I just want to give you a little bit of background information. So a few years back, my colleague Dr. Liang Ping Chi, engineering a college, he actually published a paper in nature reporting engineering of super strong wood using chemical treatment.

So after chatting with him, so we had to be inspired to seek another more sustainable way, which is rather than using chemical to remove certain ligaments in the wood material, we were genetically engineered by editing one gene called a four-year one in this case. Just one gene?

Yeah, just one gene because this gene is a kind of work is coding for enzyme involving ligament biosynthesis pathway. So if we knock out this gene, we can affect this pathway. The plant, the tree will make less, less ligament. So this is our hypothesis. So my lab is really good at the genetic engineering and genome editing. So we just apply a technique called a base editing to knock out this four-year one gene specifically in this case is popular tree.

So where we found that we can reduce about 13% of legionic content in popular tree. And this is a level typically Dr. Who's lab going to be using chemical to remove this amount of a legioning for engineering super strong wood. And then we went ahead to do the similar processing yet without doing any chemical treatment. So wait, what is legion and what does it normally do and why it is taking it out make the wood better?

That's a very good question. So liganing actually is essentially one major part of the secondary sort of cell wall material from our wood any wood material any trees. You'll find them there different tree variety have different content. And they have actually a really important role for structure and also feeling the open space in the cell wall.

But because they from tree have different level legioning because many processing of wood requires removal removal of legioning. So so it's kind of necessary to do legioning removal using chemicals when we processing with such a engineering super strong wood. And when you take it out, you've you've found that the wood is stronger, but also you've mentioned that it's it stores extra carbon dioxide. How does that work? Why is the super wood better at trapping CO2?

The idea behind this carbon section is many of the you know we grow for this we grow long birds and we use the longer to do building construction and other materials. And the super strong wood is a promising sort of material because it further engineer from natural wood because of that this wood is very strong and can resist into a lot of deterioration environment can hence last much longer.

And have wood engineer that stay there for much longer time without being sort of like degradated going releasing CO2 back to the atmosphere. So in this case, we consider we have another way to really retain the sort of fix the CO2 in the wood material. So in this way, we can sequest more carbon over time. And you've done this genetic modification in popular trees. Why did you choose to work with this kind of tree?

So the popular tree is one of the major sort of research target or past species. We are using to understand tree and also material. It is really I can grow pretty well in the temperate environment in northern atmosphere, not necessarily in the very hot environment where pine can thrive.

The real reason using popular is really for us to sort of using as a motor tree system so that we because it is amenable for genetic transformation. So the scientists like me or lab can really work on them to modify genes rapidly to create a genome engineer the trees and assess their property. So with engineer like Dr. Who. So this is really a motor system. So once we have found something's working in this case, we can expand other tree species.

So we see as the ultimate goal of this line of research. First of all, this research we just published is really just a proof concept. And ultimately what we want to do, we will actually expand this approach, this concept to the tree which are more relevant for us to use building material like pine, for example.

And then I think that would be economically that would be a lot of potential there. So this is really one major step for us to have this result. And we excited to really explore in other trees by applying similar technologies. Thank you so much for joining us. You're welcome. That was Dr. E. Ping Chi, associate professor at the Department of Plant Science and Landscape Architecture at the University of Maryland.

And that's it for today. Lots of folks up make the show this week, including deep uterusment, full of some airs. Emma Gomez, Jackie Hirschfeld, and many more. Tomorrow, Cypheri's Kathleen Davis takes us on a tour of some of the top stories from the Week in Science. And I'll look at the world's first whole eye transplant. But until then, I'm Cypheri producer Charles Berkwist. Thanks for listening.

This transcript was generated by Metacast using AI and may contain inaccuracies. Learn more about transcripts.